<?xml version="1.0" encoding="utf-8"?><!DOCTYPE article  PUBLIC '-//OASIS//DTD DocBook XML V4.4//EN'  'http://www.docbook.org/xml/4.4/docbookx.dtd'><article><articleinfo><title>FetchingData</title><revhistory><revision><revnumber>10</revnumber><date>2013-03-07 21:23:56</date><authorinitials>localhost</authorinitials><revremark>converted to 1.6 markup</revremark></revision><revision><revnumber>9</revnumber><date>2007-02-06 17:19:11</date><authorinitials>devel03.mrc-cbu.cam.ac.uk</authorinitials></revision><revision><revnumber>8</revnumber><date>2007-02-06 17:18:51</date><authorinitials>devel03.mrc-cbu.cam.ac.uk</authorinitials></revision><revision><revnumber>7</revnumber><date>2006-08-17 10:26:52</date><authorinitials>cmbg-cache-2.server.ntli.net</authorinitials></revision><revision><revnumber>6</revnumber><date>2006-07-05 12:07:46</date><authorinitials>devel03.mrc-cbu.cam.ac.uk</authorinitials></revision><revision><revnumber>5</revnumber><date>2006-07-05 12:06:19</date><authorinitials>devel03.mrc-cbu.cam.ac.uk</authorinitials></revision><revision><revnumber>4</revnumber><date>2006-07-04 16:11:16</date><authorinitials>cmbg-cache-2.server.ntli.net</authorinitials></revision><revision><revnumber>3</revnumber><date>2006-07-04 16:10:32</date><authorinitials>cmbg-cache-2.server.ntli.net</authorinitials></revision><revision><revnumber>2</revnumber><date>2006-07-04 16:09:39</date><authorinitials>cmbg-cache-2.server.ntli.net</authorinitials></revision><revision><revnumber>1</revnumber><date>2006-07-04 16:08:50</date><authorinitials>cmbg-cache-2.server.ntli.net</authorinitials></revision></revhistory></articleinfo><section><title>Fetching and converting imaging data</title><section><title>Data location</title><para>For old WBIC Bruker data see <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/imaging/FetchingData/imaging/BrukerDataLocation#">BrukerDataLocation</ulink>. </para><para>Data from the CBU scanner is stored in the <code>/mridata/cbu</code> directory in the CBU filespace.   </para><para>CBU scanner structural scans are in <code>/imaging/local/structurals/cbu</code>. WBIC structural scans in <code>/imaging/local/structurals/wbic</code>. </para><para>See <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/imaging/FetchingData/imaging/CbuComputingResources#">CbuComputingResources</ulink> for details of the automounting system.  </para></section><section><title>Other possibly useful data processing</title><itemizedlist><listitem><para><ulink url="http://pvconv.sourceforge.net">Converting Bruker data</ulink> to <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/imaging/FetchingData/imaging/FormatAnalyze#">analyze format</ulink> </para></listitem><listitem><para><ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/imaging/FetchingData/imaging/Ana4Dto3D#">4D to 3D image conversion</ulink> </para></listitem><listitem><para><ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/imaging/FetchingData/imaging/ImageJ#">Using ImageJ to manipulate data</ulink> </para></listitem><listitem><para><ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/imaging/FetchingData/imaging/ByteConversion#">ByteConversion</ulink> - byte swapping data for compatibility with different computer platforms </para></listitem></itemizedlist></section></section></article>