<?xml version="1.0" encoding="utf-8"?><!DOCTYPE article  PUBLIC '-//OASIS//DTD DocBook XML V4.4//EN'  'http://www.docbook.org/xml/4.4/docbookx.dtd'><article><articleinfo><title>MegMasterClass</title><revhistory><revision><revnumber>31</revnumber><date>2013-03-08 10:02:26</date><authorinitials>localhost</authorinitials><revremark>converted to 1.6 markup</revremark></revision><revision><revnumber>30</revnumber><date>2009-04-23 11:50:45</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>29</revnumber><date>2009-04-23 11:50:23</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>28</revnumber><date>2009-04-23 11:46:07</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>27</revnumber><date>2009-04-23 11:43:31</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>26</revnumber><date>2009-04-23 11:41:00</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>25</revnumber><date>2009-04-23 11:36:44</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>24</revnumber><date>2009-04-23 11:35:12</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>23</revnumber><date>2009-04-23 11:33:32</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>22</revnumber><date>2009-04-23 11:33:06</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>21</revnumber><date>2009-04-23 11:26:32</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>20</revnumber><date>2009-04-23 11:24:33</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>19</revnumber><date>2009-04-23 11:23:40</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>18</revnumber><date>2009-04-23 11:22:43</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>17</revnumber><date>2009-04-23 11:22:13</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>16</revnumber><date>2009-04-23 11:21:47</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>15</revnumber><date>2009-04-23 11:21:23</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>14</revnumber><date>2009-04-23 11:19:05</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>13</revnumber><date>2009-04-23 11:18:14</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>12</revnumber><date>2009-04-23 11:17:52</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>11</revnumber><date>2009-04-23 11:15:02</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>10</revnumber><date>2009-04-23 11:13:28</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>9</revnumber><date>2009-04-23 11:08:02</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>8</revnumber><date>2009-04-23 11:07:07</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>7</revnumber><date>2009-04-23 11:05:36</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>6</revnumber><date>2009-04-23 11:02:56</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>5</revnumber><date>2009-04-23 10:58:43</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>4</revnumber><date>2009-04-23 10:58:34</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>3</revnumber><date>2009-04-23 10:58:26</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>2</revnumber><date>2009-04-23 10:49:07</date><authorinitials>MarieSmith</authorinitials></revision><revision><revnumber>1</revnumber><date>2009-04-23 10:45:54</date><authorinitials>MarieSmith</authorinitials></revision></revhistory></articleinfo><section><title>MEG MasterClass</title><para>The MEG Master Class tutorial series combines theoretical discussions with practical sessions on many aspects of MEG data analysis using SPM. Working from the <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/SpmDemo#">SpmDemo</ulink> each processing step is split into a small two hour practical. See links below for individual session notes and worksheets. </para><para>Please note that these sessions do not cover max filtering of the data set - this can be done as shown at the start of the <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/SpmDemo#">SpmDemo</ulink> script and more details on the processing options are available on the <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/maxpreproc#">maxpreproc</ulink>page. </para><section><title>Session 1. Pre-processing</title><itemizedlist><listitem><para>Importing raw FIF data Into Matlab. </para></listitem><listitem><para>Spliting in Mags, Grads and EEG data sets. </para></listitem><listitem><para>Reading the Trigger line and extracting the triggers and response codes  - see also <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/IdentifyingEventsWithTriggers#">IdentifyingEventsWithTriggers</ulink> </para></listitem><listitem><para>Epoching. </para></listitem><listitem><para>Resynching to a new starting point. </para></listitem><listitem><para>Filtering. </para></listitem><listitem><para>Artefact rejection. </para></listitem><listitem><para>Contrasts. </para></listitem><listitem><para>Grand averaging. </para></listitem><listitem><para>Inspecting the results - topographies, line plots, meg_viewdata. </para></listitem></itemizedlist></section><section><title>Session 2. 3D Sensor SPM's</title><para>3D sensor SPMs can be used for a sensor level analysis and as a guide to establish critical time windows to analyse further. </para><itemizedlist><listitem><para>Generating the files. </para></listitem><listitem><para>Computing the anova. </para></listitem><listitem><para>Interpreting the results. </para></listitem></itemizedlist><para>Download the worksheet to generate the results: <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/MegMasterClass?action=AttachFile&amp;do=get&amp;target=Session2.doc">Session2.doc</ulink>  </para><para>Download the worksheet to interpret the results: <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/MegMasterClass?action=AttachFile&amp;do=get&amp;target=Session2A.doc">Session2A.doc</ulink> </para><para>Download the matlab script: <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/MegMasterClass?action=AttachFile&amp;do=get&amp;target=Session2-script.m">Session2-script.m</ulink> </para></section><section><title>Session 3. Catch up session - THEORETICAL</title><itemizedlist><listitem><para>When to take the RMS. </para></listitem><listitem><para>How are bad channels dealt with. </para></listitem><listitem><para>Things to be careful about when you have very uneven trial numbers across conditions (e.g. in an MMN expt). </para></listitem></itemizedlist></section><section><title>Session 4. Using ICA for artefact rejection</title><itemizedlist><listitem><para>How and why to use ICA. </para></listitem><listitem><para>Implementing ICA to extract eye blinks, eye movements and cardiac signals. </para></listitem></itemizedlist><para>Download the matlab script: <ulink url="https://lsr-wiki-02.mrc-cbu.cam.ac.uk/meg/MegMasterClass/meg/MegMasterClass?action=AttachFile&amp;do=get&amp;target=Session4-script.m">Session4-script.m</ulink> </para></section><section><title>Session 5. Source reconstuction - THEORETICAL</title><itemizedlist><listitem><para>Forward model, choice of inverse solution and associated parameters. </para></listitem></itemizedlist></section></section></article>