|
Size: 1078
Comment:
|
Size: 1291
Comment:
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 2: | Line 2: |
| We have two HP workstations on which Neuromag software runs fine. We also have pre-release versions that run under Linux (Redhat4). These can be called directly from the command line, and will run on a linux box with the minimal current load. | |
| Line 3: | Line 4: |
| We have two HP workstations on which these programs run fine. We also have pre-release versions that run under Linux (Redhat4), and these are currently installed on l21 only (in time, we hope to roll out onto the other Linux Boxes). | Help on connecting to a Linux machine with VNC can be found in UsingVNC |
| Line 7: | Line 8: |
| [[BR]] Max Filter - for applying SSS to averaged or raw data. Removes much noise. Necessary if Active Shielding used. Also vital for movement compensation, and many other features. | * '''Max Filter''' - for applying SSS to averaged or raw data. Removes much noise. Necessary if Active Shielding used. Also vital for movement compensation, and many other features. * '''Xplotter '''- for viewing averaged files * '''Xfit''' - for dipole fits to averaged files * '''Graph''' - flexible (though complicated) software for processing raw data (eg spectral analysis) * '''Seglab''' - for segmenting MRIs and creating BEMs * '''MRILab''' - for coregistering MRI and MEG data, and creating forward models * '''MCE''' - Minimum Current Estimate, and L1-norm distributed solution * '''Dicom Access''' - converting DICOM files to FIFF format |
| Line 9: | Line 17: |
| [[BR]] Xplotter - for viewing averaged files | If you have [wiki:CbuBaseWiki:GettingApproval Cambridge / CBU permissions], you can access the ElektaSoftwareManuals. |
| Line 11: | Line 19: |
| [[BR]] Xfit - for dipole fits to averaged files [[BR]] Graph - flexible (though complicated) software for processing raw data (eg spectral analysis) [[BR]] Seglab - for segmenting MRIs and creating BEMs [[BR]] MRILab - for coregistering data and creating head models [[BR]]More details: [attachment:MEGAnalysisLectureJan07CBU.pdf MRC CBU introductory lecture into MEG analysis]. [[BR]] If you have [wiki:CbuBaseWiki:GettingApproval Cambridge / CBU permissions], you can access the ElektaSoftwareManuals. |
For more general information on analysis with Neuromag software, visit here NeurmagAnalysis. |
Neuromag Software
We have two HP workstations on which Neuromag software runs fine. We also have pre-release versions that run under Linux (Redhat4). These can be called directly from the command line, and will run on a linux box with the minimal current load.
Help on connecting to a Linux machine with VNC can be found in UsingVNC
The Neuromag software consists of several separate programs:
Max Filter - for applying SSS to averaged or raw data. Removes much noise. Necessary if Active Shielding used. Also vital for movement compensation, and many other features.
Xplotter - for viewing averaged files
Xfit - for dipole fits to averaged files
Graph - flexible (though complicated) software for processing raw data (eg spectral analysis)
Seglab - for segmenting MRIs and creating BEMs
MRILab - for coregistering MRI and MEG data, and creating forward models
MCE - Minimum Current Estimate, and L1-norm distributed solution
Dicom Access - converting DICOM files to FIFF format
If you have [wiki:GettingApproval Cambridge / CBU permissions], you can access the ElektaSoftwareManuals.
For more general information on analysis with Neuromag software, visit here NeurmagAnalysis.